Online resources
Protocols
Laetitia Jalabert, Marc Picheral, Corinne Desnos, Amanda Elineau (2022) Zooscan protocol
Software
Training
https://software-carpentry.org/
https://amy.carpentries.org/forms/workshop/
https://github.com/carpentries-incubator
In person training possible at the PIQv in Villefranche-sur-Mer, France
Image datasets
https://www.mbari.org/fathomnet/ #project to develop benchmark datasets for segmentation and classification
– planktonset, ISIIS (~60k images; https://catalog.data.gov/dataset/planktonset-1-0-plankton-imagery-data-collected-from-f-g-walton-smith-in-straits-of-florida-fro)
– ZooScanNet (1.4M images https://www.seanoe.org/data/00446/55741/)
– UVP5 data sorted with morphocluster (1.2M images https://www.seanoe.org/data/00618/73002/)
Miscellaneous
https://repository.oceanbestpractices.org/handle/11329/1201
https://www.seashift.org/
https://nodered.org/
https://www.protocols.io/